HTSeq--a Python framework to work with high-throughput sequencing data, Bioinformatics, vol.31, pp.166-169, 2015. ,
Stressing out over long noncoding RNA, Biochim Biophys Acta, vol.1859, pp.184-191, 2016. ,
Genome Organization in and around the Nucleolus, Cells, vol.8, 2019. ,
The nucleolus under stress, Molecular cell, vol.40, pp.216-227, 2010. ,
A role for MED14 and UVH6 in heterochromatin transcription upon destabilization of silencing, Life Sci Alliance, vol.1, pp.201800197-201800197, 2018. ,
URL : https://hal.archives-ouvertes.fr/hal-02346832
A Method to Identify Nucleolus-Associated Chromatin Domains (NADs), vol.1675, pp.99-109, 2018. ,
URL : https://hal.archives-ouvertes.fr/hal-02115397
Chromosome-specific NOR inactivation explains selective rRNA gene silencing and dosage control in Arabidopsis, Genes & development, vol.30, pp.177-190, 2016. ,
URL : https://hal.archives-ouvertes.fr/hal-02185936
RFLP and physical mapping with an rDNA-specific endonuclease reveals that nucleolus organizer regions of Arabidopsis thaliana adjoin the telomeres on chromosomes 2 and 4. The Plant journal : for cell and molecular biology, vol.9, pp.259-272, 1996. ,
RFLP and physical mapping with an rDNA-specific endonuclease reveals that nucleolus organizer regions of Arabidopsis thaliana adjoin the telomeres on chromosomes 2 and 4. The Plant journal : for cell and molecular biology, vol.9, pp.259-272, 1996. ,
Nucleolus association of chromosomal domains is largely maintained in cellular senescence despite massive nuclear reorganisation, PLoS One, vol.12, 2017. ,
Nucleolin: dual roles in rDNA chromatin transcription, Gene, vol.556, pp.7-12, 2015. ,
URL : https://hal.archives-ouvertes.fr/hal-02116040
Mechanisms of HDA6-mediated rRNA gene silencing: suppression of intergenic Pol II transcription and differential effects on maintenance versus siRNA-directed cytosine methylation, Genes & development, vol.24, pp.1119-1132, 2010. ,
Coexisting Liquid Phases Underlie Nucleolar Subcompartments, Cell, vol.165, pp.1686-1697, 2016. ,
From nucleosome to chromosome: a dynamic organization of genetic information, Biochimica et biophysica acta, vol.66, pp.393-404, 2011. ,
Heat and chilling stress induce nucleolus morphological changes, J Plant Res, vol.132, pp.395-403, 2019. ,
HISAT: a fast spliced aligner with low memory requirements, Nat Methods, vol.12, pp.357-360, 2015. ,
Chromatin changes in response to drought, salinity, heat, and cold stresses in plants, Front Plant Sci, vol.6, p.114, 2015. ,
Widespread rearrangement of 3D chromatin organization underlies polycomb-mediated stress-induced silencing, Molecular cell, vol.58, pp.216-231, 2015. ,
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2, Genome Biol, vol.15, p.550, 2014. ,
The functional organization of the nucleolus in proliferating plant cells, Eur J Histochem, vol.44, pp.117-131, 2000. ,
Heat Shock Protein HSP101 Affects the Release of Ribosomal Protein mRNAs for Recovery after Heat Shock, Plant Physiol, vol.174, pp.1216-1225, 2017. ,
URL : https://hal.archives-ouvertes.fr/hal-01594829
Dynamic regulation of nucleolar architecture, Curr Opin Cell Biol, vol.52, pp.105-111, 2018. ,
Genome organization in and around the nucleolus, Trends in genetics : TIG, vol.27, pp.149-156, 2011. ,
Epigenetic regulation of repetitive elements is attenuated by prolonged heat stress in Arabidopsis, Plant Cell, vol.22, pp.3118-3129, 2010. ,
Plant nucleolar DNA: Green light shed on the role of Nucleolin in genome organization, Nucleus (Austin, Tex), vol.8, pp.11-16, 2017. ,
URL : https://hal.archives-ouvertes.fr/hal-02115388
Ribosomal RNA genes shape chromatin domains associating with the nucleolus, 2019. ,
URL : https://hal.archives-ouvertes.fr/hal-02115403
Recurrent evolution of heat-responsiveness in Brassicaceae COPIA elements, Genome Biol, vol.17, p.209, 2016. ,
URL : https://hal.archives-ouvertes.fr/hal-01607474
Nucleolin is required for DNA methylation state and the expression of rRNA gene variants in Arabidopsis thaliana, PLoS genetics, vol.6, 2010. ,
URL : https://hal.archives-ouvertes.fr/hal-00787644
Histone methyltransferases regulating rRNA gene dose and dosage control in Arabidopsis, Genes & development, vol.26, pp.945-957, 2012. ,
Subnuclear partitioning of rRNA genes between the nucleolus and nucleoplasm reflects alternative epiallelic states, Genes & development, vol.27, pp.1545-1550, 2013. ,
Fluorescence-Activated Nucleolus Sorting in Arabidopsis, Methods in molecular biology, vol.1455, pp.203-211, 2016. ,
URL : https://hal.archives-ouvertes.fr/hal-02115378
Identification of Nucleolus-Associated Chromatin Domains Reveals a Role for the Nucleolus in 3D Organization of the A. thaliana, 2016. ,
URL : https://hal.archives-ouvertes.fr/hal-02115369
, Genome. Cell reports, vol.16, pp.1574-1587
Chromatin domains in space and their functional implications, Curr Opin Plant Biol, vol.54, pp.1-10, 2019. ,
URL : https://hal.archives-ouvertes.fr/hal-02428536
Characterization of AtNUC-L1 reveals a central role of nucleolin in nucleolus organization and silencing of AtNUC-L2 gene in Arabidopsis, Molecular biology of the cell, vol.18, pp.369-379, 2007. ,
URL : https://hal.archives-ouvertes.fr/hal-00164253
The LINC complex contributes to heterochromatin organisation and transcriptional gene silencing in plants, J Cell Sci, vol.130, pp.590-601, 2017. ,
URL : https://hal.archives-ouvertes.fr/inserm-01629338
The structure and function of small nucleolar ribonucleoproteins, Nucleic Acids Res, vol.35, pp.1452-1464, 2007. ,
Ribosome Biogenesis in Plants: from Functional 45S Ribosomal DNA Organization to Ribosome Assembly Factors, Plant Cell, 2019. ,
URL : https://hal.archives-ouvertes.fr/hal-02165772
Correlative microscopy: bridging the gap between fluorescence light microscopy and cryo-electron tomography, J Struct Biol, vol.160, pp.135-145, 2007. ,
Abundance and distribution of RNA polymerase II in Arabidopsis interphase nuclei, Journal of experimental botany, vol.66, pp.1687-1698, 2015. ,
Functional ultrastructure of the plant nucleolus, Protoplasma, vol.251, pp.1285-1306, 2014. ,
Stress-induced activation of heterochromatic transcription, PLoS Genet, vol.6, pp.1001175-1001175, 2010. ,
URL : https://hal.archives-ouvertes.fr/hal-01917179
Nucleolar dominance and ribosomal RNA gene silencing, Current opinion in cell biology, vol.22, pp.351-356, 2010. ,
Arabidopsis HIT4 encodes a novel chromocentrelocalized protein involved in the heat reactivation of transcriptionally silent loci and is essential for heat tolerance in plants, J Exp Bot, vol.64, pp.1689-1701, 2013. ,
Arabidopsis HIT4, a regulator involved in heattriggered reorganization of chromatin and release of transcriptional gene silencing, relocates from chromocenters to the nucleolus in response to heat stress, New Phytol, vol.205, pp.544-554, 2015. ,
Heat shock represses rRNA synthesis by inactivation of TIF-IA and lncRNA-dependent changes in nucleosome positioning, Nucleic Acids Res, vol.44, pp.8144-8152, 2016. ,