M. O. Nadon, Re-creating missing population baselines for Pacific reef sharks, Conserv. Biol, vol.26, pp.493-503, 2012.

B. Worm, Global catches, exploitation rates, and rebuilding options for sharks, Mar. Pol, vol.40, pp.194-204, 2013.

N. K. Dulvy, Extinction risk and conservation of the world's sharks and rays, vol.3, 2014.

R. A. Myers, J. K. Baum, T. D. Shepherd, S. P. Powers, and C. H. Peterson, Cascading effects of the loss of apex predatory sharks from a coastal ocean, Science, vol.315, pp.1846-1850, 2007.

J. K. Baum and B. Worm, Cascading top-down effects of changing oceanic predator abundances, J. Anim. Ecol, vol.78, pp.699-714, 2009.

J. A. Estes, Trophic downgrading of planet earth, Science, vol.333, pp.301-306, 2011.

R. R. Domingues, A. W. Hilsdorf, and O. B. Gadig, The importance of considering genetic diversity in shark and ray conservation policies, Conserv. Genet, vol.19, pp.501-525, 2018.

G. J. Osgood and J. K. Baum, Reef sharks: recent advances in ecological understanding to inform conservation, J. Fish Biol, vol.87, pp.1489-1523, 2015.

A. J. Frisch, Reassessing the trophic role of reef sharks as apex predators on coral reefs, Coral Reefs, vol.35, pp.459-472, 2016.

G. Roff, The ecological role of sharks on coral reefs, Trends Ecol. Evol, vol.31, pp.395-407, 2016.

T. M. Vignaud, Genetic structure of populations of whale sharks among ocean basins and evidence for their historic rise and recent decline, Mol. Ecol, vol.23, pp.2590-2601, 2014.
URL : https://hal.archives-ouvertes.fr/hal-01100960

D. A. Pazmino, Strong trans-Pacific break and local conservation units in the Galapagos shark (Carcharhinus galapagensis) revealed by genome-wide cytonuclear markers, Heredity, vol.120, pp.407-421, 2018.

B. J. Holmes, Population structure and connectivity of tiger sharks (Galeocerdo cuvier) across the Indo-Pacific Ocean basin, R. Soc. Open Sci, vol.4, 2017.

T. M. Vignaud, Blacktip reef sharks, Carcharhinus melanopterus, have high genetic structure and varying demographic histories in their Indo-Pacific range, Mol. Ecol, vol.23, pp.5193-5207, 2014.

J. Mourier and S. Planes, Direct genetic evidence for reproductive philopatry and associated fine-scale migrations in female blacktip reef sharks (Carcharhinus melanopterus) in French Polynesia, Mol. Ecol, vol.22, pp.201-214, 2013.

N. M. Whitney, W. D. Robbins, J. K. Schultz, B. W. Bowen, and K. N. Holland, Oceanic dispersal in a sedentary reef shark (Triaenodon obesus): genetic evidence for extensive connectivity without a pelagic larval stage, J. Biogeogr, vol.39, pp.1144-1156, 2012.

L. J. Compagno, Sharks of the world. An annotated and illustrated catalogue of shark species known to date. Part 2, Carcharhiniformes. FAO Fish Synopsis, vol.4, pp.251-655, 1984.

B. M. Wetherbee, G. L. Crow, and C. G. Lowe, Distribution, reproduction and diet of the gray reef shark Carcharhinus amblyrhynchos in Hawaii, Mar. Ecol.-Prog. Ser, vol.151, pp.181-189, 1997.

A. M. Friedlander, The real bounty: marine biodiversity in the Pitcairn Islands, PLoS One, vol.9, 2014.

E. Clua and T. Vignaud, Possible collapse of reef shark populations in remote coral reef ecosystems in the Coral Sea (Western Pacific), Cybium, vol.40, pp.51-59, 2016.
URL : https://hal.archives-ouvertes.fr/hal-01281158

C. W. Speed, I. C. Field, M. G. Meekan, and C. J. Bradshaw, Complexities of coastal shark movements and their implications for management, Mar Ecol-Prog Ser, vol.408, pp.275-305, 2010.

J. N. Mckibben and D. R. Nelson, Patterns of movement and grouping of gray reef sharks, Carcharhinus amblyrhynchos, at Enewetak, Marshall Islands, Bull. Mar. Sci, vol.38, pp.89-110, 1986.

M. R. Heupel, C. A. Simpfendorfer, and R. Fitzpatrick, Large-scale movement and reef fidelity of gray reef sharks, PLoS One, vol.5, 2010.

M. Espinoza, M. R. Heupel, A. J. Tobin, and C. A. Simpfendorfer, Residency patterns and movements of gray reef sharks (Carcharhinus amblyrhynchos) in semi-isolated coral reef habitats, Mar. Biol, vol.162, pp.343-358, 2015.

D. R. Nelson and R. H. Johnson, Behavior of the reef sharks of Rangiroa, National Geographic Society Research Report, vol.12, pp.479-499, 1980.

M. R. Heupel and C. A. Simpfendorfer, Importance of environmental and biological drivers in the presence and space use of a reefassociated shark, Mar. Ecol.-Prog. Ser, vol.496, pp.47-57, 2014.

A. Barnett, K. G. Abrantes, J. Seymour, and R. Fitzpatrick, Residency and spatial use by reef sharks of an isolated seamount and its implications for conservation, PLoS One, vol.7, 2012.

T. D. White, Assessing the effectiveness of a large marine protected area for reef shark conservation, Biol. Conserv, vol.207, pp.64-71, 2017.

P. Momigliano, R. Harcourt, W. D. Robbins, and A. Stow, Connectivity in grey reef sharks (Carcharhinus amblyrhynchos) determined using empirical and simulated genetic data, Sci Rep, vol.5, 2015.

P. Momigliano, Genetic structure and signatures of selection in grey reef sharks (Carcharhinus amblyrhynchos), Heredity, vol.119, pp.142-153, 2017.

C. Mora and P. F. Sale, Are populations of coral reef fish open or closed?, Trends Ecol Evol, vol.17, issue.02, pp.2584-2587, 2002.

W. O. Mcmillan and S. R. Palumbi, Concordant evolutionary patterns among Indo-West Pacific butterflyfishes, Proc. R. Soc. B-Biol. Sci, vol.260, pp.229-236, 1995.

M. R. Gaither and L. A. Rocha, Origins of species richness in the Indo-Malay-Philippine biodiversity hotspot: evidence for the centre of overlap hypothesis, J. Biogeogr, vol.40, pp.1638-1648, 2013.

K. M. Duncan, A. P. Martin, B. W. Bowen, and H. G. De-couet, Global phylogeography of the scalloped hammerhead shark (Sphyrna lewini), Mol. Ecol, vol.15, pp.2239-2251, 2006.

D. B. Keeney and E. J. Heist, Worldwide phylogeography of the blacktip shark (Carcharhinus limbatus) inferred from mitochondrial DNA reveals isolation of western Atlantic populations coupled with recent Pacific dispersal, Mol. Ecol, vol.15, pp.3669-3679, 2006.

J. C. Briggs, . Marine, and . Mcgraw-hill, , 1974.

A. P. Martin, Substitution rates of organelle and nuclear genes in sharks: Implicating metabolic rate (again), Mol. Biol. Evol, vol.16, pp.996-1002, 1999.

J. P. Hobbs, A. J. Frisch, G. R. Allen, and L. Van-herwerden, Marine hybrid hotspot at Indo-Pacific biogeographic border, Biol. Lett, vol.5, pp.258-261, 2009.

S. Planes and C. Fauvelot, Isolation by distance and vicariance drive genetic structure of a coral reef fish in the Pacific Ocean, Evolution, vol.56, pp.378-399, 2002.

T. B. Hoareau, E. Boissin, and P. Berrebi, Evolutionary history of a widespread Indo-Pacific goby: The role of Pleistocene sea-level changes on demographic contraction/expansion dynamics, Mol. Phylogenet. Evol, vol.62, pp.566-572, 2012.

J. K. Schultz, Global phylogeography and seascape genetics of the lemon sharks (genus Negaprion), Mol. Ecol, vol.17, pp.5336-5348, 2008.

G. Bernardi, S. J. Holbrook, and R. J. Schmitt, Gene flow at three spatial scales in a coral reef fish, the three-spot dascyllus, Dascyllus trimaculatus, Mar. Biol, vol.138, pp.457-465, 2001.

J. A. Eble, L. A. Rocha, M. T. Craig, and B. W. Bowen, Not all larvae stay close to home: insights into marine population connectivity with a focus on the brown surgeonfish (Acanthurus nigrofuscus), p.12, 2011.

S. Tabata, The general circulation of the Pacific Ocean and a brief account of the oceanographic structure of the North Pacific Ocean. Part I -circulation and volume transports, Atmosphere, vol.13, pp.133-168, 1975.

E. Martinez, A. Ganachaud, J. Lefevre, and K. Maamaatuaiahutapu, Central South Pacific thermocline water circulation from a high-resolution ocean model validated against satellite data: Seasonal variability and El Niño 1997-1998 influence, Journal of Geophysical Research, 2009.

T. Vignaud, E. Clua, J. Mourier, J. Maynard, and S. Planes, Microsatellite analyses of blacktip reef sharks (Carcharhinus melanopterus) in a fragmented environment show structured clusters, PLoS One, vol.8, 2013.

S. Johri, M. P. Doane, L. Allen, and E. A. Dinsdale, Taking Advantage of the Genomics Revolution for Monitoring and Conservation of Chondrichthyan Populations, Diversity, vol.11, 2019.

C. S. Baker, Population structure of nuclear and mitochondrial DNA variation among humpback whales in the North Pacific, Mol. Ecol, vol.7, pp.695-707, 1998.

B. P. Wallace, Global conservation priorities for marine turtles, PLoS One, vol.6, 2011.

J. B. Juhel, Isolation and no-entry marine reserves mitigate anthropogenic impacts on grey reef shark behavior, Sci Rep, vol.9, 2019.
URL : https://hal.archives-ouvertes.fr/hal-02413866

M. R. Gaither, R. J. Toonen, D. R. Robertson, S. Planes, and B. W. Bowen, Genetic evaluation of marine biogeographical barriers: perspectives from two widespread Indo-Pacific snappers (Lutjanus kasmira and Lutjanus fulvus), J. Biogeogr, vol.37, pp.133-147, 2010.
URL : https://hal.archives-ouvertes.fr/hal-00609442

J. Mourier, Extreme inverted trophic pyramid of reef sharks supported by spawning groupers, Curr. Biol, vol.26, 2011.
URL : https://hal.archives-ouvertes.fr/hal-01359391

E. Boissin, V. Neglia, F. Boulet-colomb-d'hauterserre, M. Tatarata, and S. Planes, Evolutionary history of green turtle populations, Chelonia mydas, from French Polynesia highlights the putative existence of a glacial refugium, Mar. Biodivers
URL : https://hal.archives-ouvertes.fr/hal-02431745

M. P. Jensen, The evolutionary history and global phylogeography of the green turtle (Chelonia mydas), J. Biogeogr, vol.46, pp.860-870, 2019.
URL : https://hal.archives-ouvertes.fr/hal-02434196

R. Van-hooidonk, J. A. Maynard, and S. Planes, Temporary refugia for coral reefs in a warming world, Nat. Clim. Chang, vol.3, pp.508-511, 2013.

L. A. Freeman, Robust performance of marginal Pacific coral reef habitats in future climate scenarios, PLoS One, vol.10, 2015.

P. Momigliano, W. D. Robbins, M. Gardner, and A. Stow, Characterisation of 15 novel microsatellite loci for the grey reef shark (Carcharhinus amblyrhynchos), Conserv. Genet. Resour, vol.6, pp.661-663, 2014.

C. Van-oosterhout, W. F. Hutchinson, D. P. Wills, and P. Shipley, MICRO-CHECKER: software for identifying and correcting genotyping errors in microsatellite data, Mol. Ecol. Notes, vol.4, pp.535-538, 2004.

K. Belkhir, P. Borsa, L. Chikhi, N. Raufaste, and F. Bonhomme, GENETIX 4.05, logiciel sous Windows TM pour la génétique des populations, Laboratoire Génome, Populations, Interactions, CNRS UMR 5000, 1996.

R. Peakall and P. E. Smouse, GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research-an update, Bioinformatics, vol.28, pp.2537-2539, 2012.

Y. Benjamini and Y. Hochberg, Controlling the false discovery rate -a practical and powerful approach to multiple testing, J. R. Stat. Soc. Ser. B-Methodol, vol.57, pp.289-300, 1995.

J. K. Pritchard, M. Stephens, and P. Donnelly, Inference of population structure using multilocus genotype data, Genetics, vol.155, pp.945-959, 2000.

M. J. Hubisz, D. Falush, M. Stephens, and J. K. Pritchard, Inferring weak population structure with the assistance of sample group information, Mol. Ecol. Resour, vol.9, pp.1322-1332, 2009.

G. Evanno, S. Regnaut, and J. Goudet, Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study, Mol. Ecol, vol.14, pp.2611-2620, 2005.

D. A. Earl and B. M. Vonholdt, STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method, Conserv. Genet. Resour, vol.4, pp.359-361, 2012.

F. Rousset, Genetic differentiation and estimation of gene flow from F-statistics under isolation by distance, Genetics, vol.145, pp.1219-1228, 1997.